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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815489.1_cds_XP_016498351.1_12389
CDS Infomation

[gene=LOC107817086] [db_xref=GeneID:107817086] [protein=putative auxin efflux carrier component 5 isoform X4] [protein_id=XP_016498351.1] [location=complement(join(6557..6623,6719..6795,6864..7021,7115..7200,7300..7469,8069..8611))] [gbkey=CDS]
Sequence

ATGATATCCCTACGTGATGTCTACCATGTCGTGGCAGCCACTATCCCTTTATATGTCGTC
ATGATCTTAGCCTATATTTCTGTAAGATGGTGGAAACTCTTTTCACCAGAGCAATGCTCT
GGCATCAACAAGTTTGTGGCGAAATTTTCAATACCTTTATTATCCTTCCAAGTGATATCA
GAAAGCAACCTCTACAAAGTAAATCTGAAGCTTCTATTAGCAGATTTCATACAAAAAATT
CTTGCTCTCTTTCTACTGGCAGTTTTTGCCAAACTGAAGCCCAGAGGAAACCTGACTTGG
ATCATAACAGGTCTTTCGGTTTCAACCCTTCCAAACACCTTAATCTTGGGGATTCCACTA
GTAAAGGCCATTTTTGGTGATGCAGCAGCAGAACTACTAGTGCAGATAATTGTACTACAG
AGTTTAATTTGGTACAACCTCCTACTATTCTTGTTTGAGCTCAATGCAACTAAAGAATCT
TATGTGCCATCACCATCGGAAGTAGCAGGTATGTACACAGATAACAGAACATGGTTCCTA
AATGTCCCTGAAGAATCAGAACTAGAAGAGGACAGGGAGGAGGAAGCAAAAGCCATATGC
CCGAGGAAGACAAAGATTATGCTAATTCTTCTAACAGTTGGAAGGAAACTCATAATAAAT
CCTAATACACATGCAACTCTTGCGGGTATTATTTGGTCCGGCATACACTTCAGGTGGGGA
ATCAATCTACCAACAATTGTTGGACGATCAATATCAATACTTTCAGATGGAGGGCTAGGA
ATGGCAATGTTTAGCATAGGTGTTTTCATGGCATCCCAAGCTAGTATTATAGCATGCGGA
ACCAGAAAAGCAATATTAGCAATGGCACTAAAGTTTGTTCTTGGACCTGTACTCATGGCA
ATCTCATCTATTGCTGTTGGACTAAGGGGAAAATTGCTAAAATTGGCGATAGTGCAGGCA
GCCCTTCCCCAAGGAATCGTTCCTTTTGTGTTTGCCAAGGAATATAACATACATCCTACT
ATCTTAAGTACAGGGGTAATCTTTGGCATGCTGATCGCAATACCAATTGCTTTGGCATAC
TATTTCCTTTTGGAAATATGA

Peptide Sequence

PEP ID

XP_016498351.1
PEP Infomation

PREDICTED: putative auxin efflux carrier component 5 isoform X4 [Nicotiana tabacum]
Sequence

MISLRDVYHVVAATIPLYVVMILAYISVRWWKLFSPEQCSGINKFVAKFSIPLLSFQVIS
ESNLYKVNLKLLLADFIQKILALFLLAVFAKLKPRGNLTWIITGLSVSTLPNTLILGIPL
VKAIFGDAAAELLVQIIVLQSLIWYNLLLFLFELNATKESYVPSPSEVAGMYTDNRTWFL
NVPEESELEEDREEEAKAICPRKTKIMLILLTVGRKLIINPNTHATLAGIIWSGIHFRWG
INLPTIVGRSISILSDGGLGMAMFSIGVFMASQASIIACGTRKAILAMALKFVLGPVLMA
ISSIAVGLRGKLLKLAIVQAALPQGIVPFVFAKEYNIHPTILSTGVIFGMLIAIPIALAY
YFLLEI

Transcript Sequence

Gene sequence data has not been registered.